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  5. Cre03.g156100

Cre03.g156100 (MDF, DOT2)


Aliases : MDF, DOT2

Description : SART-1 family protein DOT2 OS=Arabidopsis thaliana


Gene families : OG0004143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g156100
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Adi_g036689 MDF, DOT2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g21182 MDF, DOT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49913 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03521 MDF, DOT2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g15840 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07125 MDF, DOT2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_12198 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Pir_g10410 MDF, DOT2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g14031 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo404232 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g008460.1.1 MDF, DOT2, Solyc11g008460 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g008470.2.1 MDF, DOT2, Solyc11g008470 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e018582_P001 MDF, DOT2, Zm00001e018582 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR005011 SNU66/SART1 682 723
IPR005011 SNU66/SART1 10 649
No external refs found!