Cre03.g146487 (XPO1A, HIT2, ATCRM1,...)

Aliases : XPO1A, HIT2, ATCRM1, XPO1, ATXPO1

Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO1 export karyopherin

Gene families : OG0003383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003383_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre03.g146487
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
Adi_g018503	XPO1A, HIT2,...	nucleocytoplasmic export karyopherin *(XPO1) & original...	0.04	OrthoFinder output from all 47 species
Ala_g06015	XPO1A, HIT2,...	nucleocytoplasmic export karyopherin *(XPO1) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene60835.t1	XPO1A, HIT2,...	nucleocytoplasmic export karyopherin *(XPO1) & original...	0.02	OrthoFinder output from all 47 species
Dde_g02403	XPO1A, HIT2,...	nucleocytoplasmic export karyopherin *(XPO1) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01024418001	XPO1A, HIT2,...	Protein translocation.nucleus.nucleocytoplasmic...	0.02	OrthoFinder output from all 47 species
Gb_02784	XPO1A, HIT2,...	Protein EXPORTIN 1A OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Gb_02785	XPO1A, HIT2,...	Protein EXPORTIN 1A OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Gb_26953	XPO1A, HIT2,...	XPO1 nucleocytoplasmic export karyopherin	0.02	OrthoFinder output from all 47 species
Mp7g03970.1	XPO1A, HIT2,...	XPO1 nucleocytoplasmic export karyopherin	0.05	OrthoFinder output from all 47 species
Pir_g11402	XPO1A, HIT2,...	nucleocytoplasmic export karyopherin *(XPO1) & original...	0.02	OrthoFinder output from all 47 species
Sam_g40475	No alias	nucleocytoplasmic export karyopherin *(XPO1) & original...	0.02	OrthoFinder output from all 47 species
Smo233936	XPO1A, HIT2,...	Protein translocation.nucleus.nucleocytoplasmic...	0.02	OrthoFinder output from all 47 species
Solyc03g096920.3.1	XPO1A, HIT2,...	XPO1 nucleocytoplasmic export karyopherin	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	HCCA
CC	GO:0030131	clathrin adaptor complex	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014877	XPO1_C_dom	706	1027
IPR013598	Exportin-1/Importin-b-like	117	258
IPR001494	Importin-beta_N	37	102

External Links

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Cre03.g146487 (XPO1A, HIT2, ATCRM1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation