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  5. Cre03.g145227

Cre03.g145227


Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.VPS4-VTA1 ESCRT-disassembly complex.VTA1 regulator component


Gene families : OG0003219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g145227
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0157.g053823 No alias regulatory component *(VTA1) of VPS4-VTA1... 0.02 OrthoFinder output from all 47 species
Ceric.23G002200.1 Ceric.23G002200 regulatory component *(VTA1) of VPS4-VTA1... 0.01 OrthoFinder output from all 47 species
LOC_Os06g20390.1 LOC_Os06g20390 regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.01 OrthoFinder output from all 47 species
Lfl_g01259 No alias regulatory component *(VTA1) of VPS4-VTA1... 0.02 OrthoFinder output from all 47 species
Msp_g24288 No alias regulatory component *(VTA1) of VPS4-VTA1... 0.02 OrthoFinder output from all 47 species
Nbi_g29973 No alias regulatory component *(VTA1) of VPS4-VTA1... 0.01 OrthoFinder output from all 47 species
Solyc07g064980.3.1 Solyc07g064980 regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.02 OrthoFinder output from all 47 species
Tin_g00871 No alias regulatory component *(VTA1) of VPS4-VTA1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR039431 Vta1/CALS_N 14 153
No external refs found!