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  5. Cre02.g104550

Cre02.g104550


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.CDC73/PHP component


Gene families : OG0005658 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g104550

Target Alias Description ECC score Gene Family Method Actions
Adi_g025017 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.01 OrthoFinder output from all 47 species
GSVIVT01018007001 CDC73, PHP RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from all 47 species
Mp1g17000.1 CDC73, PHP component CDC73/PHP of PAF1C transcription initiation... 0.05 OrthoFinder output from all 47 species
Ore_g40644 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Pir_g10744 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.01 OrthoFinder output from all 47 species
Ppi_g03750 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR031336 CDC73_C 317 473
IPR032041 Cdc73_N 2 135
No external refs found!