Cre02.g086750

No description available

Gene families : OG0005678 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005678_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre02.g086750

Target	Alias	Description	ECC score	Gene Family Method
Aob_g07707	No alias	component *(NRPA7) of RNA polymerase I complex &...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020675.101	No alias	No description available	0.04	OrthoFinder output from all 47 species
Dcu_g15852	No alias	component *(NRPA7) of RNA polymerase I complex &...	0.01	OrthoFinder output from all 47 species
LOC_Os12g34854.1	LOC_Os12g34854	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
Mp4g07550.1	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Nbi_g05130	No alias	component *(NRPA7) of RNA polymerase I complex &...	0.03	OrthoFinder output from all 47 species
Pp3c15_23380V3.1	Pp3c15_23380	DNA-directed RNA polymerases	0.02	OrthoFinder output from all 47 species
Sam_g08529	No alias	component *(NRPA7) of RNA polymerase I complex &...	0.02	OrthoFinder output from all 47 species
Smo405539	No alias	No description available	0.01	OrthoFinder output from all 47 species
Spa_g06112	No alias	component *(NRPA7) of RNA polymerase I complex &...	0.02	OrthoFinder output from all 47 species
Zm00001e039729_P002	Zm00001e039729	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005576	Rpb7-like_N	17	84

External Links

No external refs found!

Cre02.g086750

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation