Aliases : ATSMC2
Description : Cell cycle.mitosis and meiosis.chromatin condensation.condensin I/II complex.CAP-E2/SMC2 component
Gene families : OG0005512 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005512_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00193070 | ATSMC2,... | Cell cycle.mitosis and meiosis.chromatin... | 0.04 | OrthoFinder output from all 47 species | |
AT3G47460 | ATSMC2 | Structural maintenance of chromosomes (SMC) family protein | 0.05 | OrthoFinder output from all 47 species | |
AT5G62410 | TTN3, ATSMC4,... | structural maintenance of chromosomes 2 | 0.05 | OrthoFinder output from all 47 species | |
Adi_g078006 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.01 | OrthoFinder output from all 47 species | |
Adi_g117141 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g23199 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.08 | OrthoFinder output from all 47 species | |
Als_g01195 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.07 | OrthoFinder output from all 47 species | |
Aop_g05581 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.06 | OrthoFinder output from all 47 species | |
Aspi01Gene72499.t1 | ATSMC2, Aspi01Gene72499 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.07 | OrthoFinder output from all 47 species | |
Azfi_s0003.g007776 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.12G044400.1 | ATSMC2, Ceric.12G044400 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.11 | OrthoFinder output from all 47 species | |
Ceric.15G020500.1 | ATSMC2, Ceric.15G020500 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.12 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000615.55 | TTN3, ATSMC4,... | Cell cycle.mitosis and meiosis.chromatin... | 0.08 | OrthoFinder output from all 47 species | |
Dac_g14763 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g03186 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.12 | OrthoFinder output from all 47 species | |
GSVIVT01018715001 | ATSMC2 | Cell cycle.mitosis and meiosis.chromatin... | 0.07 | OrthoFinder output from all 47 species | |
Gb_17843 | ATSMC2 | component CAP-E2/SMC2 of condensin I/II complex | 0.12 | OrthoFinder output from all 47 species | |
LOC_Os01g67740.1 | ATSMC2, LOC_Os01g67740 | component CAP-E2/SMC2 of condensin I/II complex | 0.04 | OrthoFinder output from all 47 species | |
Len_g12256 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g37430 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.05 | OrthoFinder output from all 47 species | |
MA_15346g0010 | ATSMC2 | component CAP-E2/SMC2 of condensin I/II complex | 0.05 | OrthoFinder output from all 47 species | |
Mp1g04330.1 | ATSMC2 | component CAP-E2/SMC2 of condensin I/II complex | 0.09 | OrthoFinder output from all 47 species | |
Msp_g14469 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.09 | OrthoFinder output from all 47 species | |
Nbi_g02470 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.09 | OrthoFinder output from all 47 species | |
Ppi_g29913 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0197.g025517 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g14601 | No alias | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.04 | OrthoFinder output from all 47 species | |
Smo137981 | ATSMC2 | Cell cycle.mitosis and meiosis.chromatin... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g093250.2.1 | ATSMC2, Solyc03g093250 | component CAP-E2/SMC2 of condensin I/II complex | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g093260.3.1 | ATSMC2, Solyc03g093260 | component CAP-E2/SMC2 of condensin I/II complex | 0.07 | OrthoFinder output from all 47 species | |
Spa_g41237 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.07 | OrthoFinder output from all 47 species | |
Tin_g10631 | ATSMC2 | component *(CAP-E2/SMC2) of condensin I/II complex &... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e018930_P001 | ATSMC2, Zm00001e018930 | component CAP-E2/SMC2 of condensin I/II complex | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0005694 | chromosome | IEA | Interproscan |
BP | GO:0051276 | chromosome organization | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000776 | kinetochore | IEP | HCCA |
CC | GO:0000796 | condensin complex | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
BP | GO:0007076 | mitotic chromosome condensation | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0022402 | cell cycle process | IEP | HCCA |
BP | GO:0030261 | chromosome condensation | IEP | HCCA |
CC | GO:0031262 | Ndc80 complex | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
CC | GO:0099080 | supramolecular complex | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
BP | GO:1903047 | mitotic cell cycle process | IEP | HCCA |
No external refs found! |