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  5. Cre01.g058886

Cre01.g058886


Description : Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana


Gene families : OG0001761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g058886

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00071330 evm_27.TU.AmTr_v1... Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g011447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g46720 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g01799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12988 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g01420 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g03788 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene53161.t1 Aspi01Gene53161 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0021.g015729 No alias not classified & original description: CDS=267-1469 0.01 OrthoFinder output from all 47 species
Cba_g16381 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020603.43 ATDRG, DRG1, ATDRG1 Developmentally-regulated G-protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.31 No alias Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_16052 No alias Developmentally-regulated G-protein 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g28940.1 LOC_Os05g28940 Developmentally-regulated G-protein 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g06937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_115530g0010 No alias Developmentally-regulated G-protein 3 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp3g16620.1 No alias Developmentally-regulated G-protein 3 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp3g17880.1 No alias Developmentally-regulated G-protein 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g04283 ATDRG, DRG1, ATDRG1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003192 No alias not classified & original description: CDS=1-1224 0.01 OrthoFinder output from all 47 species
Smo75620 No alias Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc04g051830.4.1 Solyc04g051830 Developmentally-regulated G-protein 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g09811 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004095 TGS 290 366
IPR031662 GTP-binding_2 184 289
IPR006073 GTP-bd 64 164
No external refs found!