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  5. Cre01.g055400

Cre01.g055400


No description available


Gene families : OG0004086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g055400

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00029780 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G57120 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Aev_g07861 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g30661 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g05700 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_10298 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g15266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35875 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10243517g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_410691g0020 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Sam_g38099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g008330.3.1 Solyc07g008330 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR007718 Srp40_C 284 355
No external refs found!