Cre01.g053850 (SPA2)


Aliases : SPA2

Description : WD repeat-containing protein RUP1 OS=Arabidopsis thaliana


Gene families : OG0005734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005734_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g053850
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT5G23730 RUP2 Transducin/WD40 repeat-like superfamily protein 0.01 OrthoFinder output from all 47 species
Aev_g29573 RUP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39869 RUP1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g11227 RUP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16855 RUP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g54169 RUP1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24508.t1 RUP1, Aspi01Gene24508 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70824.t1 RUP2, Aspi01Gene70824 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G069200.1 RUP1, Ceric.06G069200 not classified & original description: pacid=50620572... 0.02 OrthoFinder output from all 47 species
Dac_g21580 RUP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21213 RUP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21287 RUP2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g50474 RUP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14954 RUP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_09448 RUP2 protein kinase (PEK) 0.04 OrthoFinder output from all 47 species
Lfl_g03215 RUP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g18040.1 RUP2 protein kinase (PEK) 0.04 OrthoFinder output from all 47 species
Nbi_g01266 RUP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03284 RUP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14587 RUP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo409247 RUP2 Protein modification.phosphorylation.PEK kinase 0.04 OrthoFinder output from all 47 species
Solyc11g005190.3.1 RUP2, Solyc11g005190 protein kinase (PEK). RUP UV-B-light perception regulator protein 0.02 OrthoFinder output from all 47 species
Tin_g18887 RUP2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g45473 RUP1 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 396 427
IPR001680 WD40_repeat 559 594
No external refs found!