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  5. Cre01.g047550

Cre01.g047550 (RAB6A, ATRABH1B, ATRAB6A, RAB6)


Aliases : RAB6A, ATRABH1B, ATRAB6A, RAB6

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.H-class RAB GTPase


Gene families : OG0001773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001773_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g047550

Target Alias Description ECC score Gene Family Method Actions
AT2G44610 RAB6A, ATRABH1B,... Ras-related small GTP-binding family protein 0.07 OrthoFinder output from all 47 species
AT5G64990 AtRABH1a, RABH1a RAB GTPase homolog H1A 0.01 OrthoFinder output from all 47 species
Ala_g06784 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07680 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08604 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07607 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g07608 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52153.t1 AtRABH1e,... H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64887.t1 RABH1d,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0081.g038634 AtRABH1e, RABH1e H-class RAB GTPase & original description: CDS=162-800 0.02 OrthoFinder output from all 47 species
Azfi_s0330.g065386 RAB6A, ATRABH1B,... H-class RAB GTPase & original description: CDS=51-656 0.02 OrthoFinder output from all 47 species
Ceric.01G018400.1 AtRABH1e,... H-class RAB GTPase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.30G035400.1 AtRABH1e,... H-class RAB GTPase & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021464.53 AtRABH1e, RABH1e Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
Dcu_g07473 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09589 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g13691 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013222001 RAB6A, ATRABH1B,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
GSVIVT01018361001 RAB6A, ATRABH1B,... Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
LOC_Os07g31370.1 RAB6A, ATRABH1B,... H-class RAB GTPase 0.05 OrthoFinder output from all 47 species
Len_g58410 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g03960.1 AtRABH1e, RABH1e H-class RAB GTPase 0.05 OrthoFinder output from all 47 species
Msp_g02711 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41066 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15790 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g21059 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03582 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g12814 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14132 No alias H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g051570.3.1 AtRABH1e,... H-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Spa_g05988 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g08278 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g15125 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25341 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01599 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e035034_P001 RAB6A, ATRABH1B,... H-class RAB GTPase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 13 171
No external refs found!