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  5. Cre01.g044650

Cre01.g044650 (NTMC2T1.2, SYTB,...)


Aliases : NTMC2T1.2, SYTB, SYT2, NTMC2TYPE1.2, ATSYTB

Description : Synaptotagmin-2 OS=Arabidopsis thaliana


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g044650

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00267880 NTMC2TYPE4,... Synaptotagmin-4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00055p00090070 NTMC2T1.2, SYTB,... Synaptotagmin-1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT1G20080 NTMC2T1.2, SYTB,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
AT5G04220 NTMC2T1.3, SYT3,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
Adi_g002005 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082961 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.01 OrthoFinder output from all 47 species
Adi_g088411 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g110748 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17634 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Ala_g24226 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59284 SYT5, NTMC2T2.1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g07889 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15096.t1 NTMC2TYPE4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48117.t1 SYT5, NTMC2T2.1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g02633 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Cba_g24753 NTMC2T1.2, SYTB,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g15704 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g03859 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012829001 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01024034001 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_36053 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g55220.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Len_g02359 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g09920.1 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.04 OrthoFinder output from all 47 species
Mp4g17950.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g02059 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Nbi_g09971 SYT5, NTMC2T2.1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pp3c4_12110V3.1 SYT5, NTMC2T2.1,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
Ppi_g60838 SYT5, NTMC2T2.1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g24830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39515 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g111520.3.1 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.01 OrthoFinder output from all 47 species
Solyc10g017590.3.1 NTMC2TYPE4,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Spa_g09558 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g20826 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.01 OrthoFinder output from all 47 species
Zm00001e006764_P001 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 612 697
IPR039010 Synaptotagmin_SMP 327 515
No external refs found!