Cre01.g031050 (GTA02, GTA2)


Aliases : GTA02, GTA2

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SPT4/5 transcription elongation factor complex.SPT5 component


Gene families : OG0002736 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002736_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g031050

Target Alias Description ECC score Gene Family Method Actions
AT4G08350 GTA02, GTA2 global transcription factor group A2 0.02 OrthoFinder output from all 47 species
Adi_g122061 GTA02, GTA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05130 GTA02, GTA2 component *(SPT5) of SPT4/5 transcription elongation... 0.01 OrthoFinder output from all 47 species
Als_g39836 GTA02, GTA2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56334.t1 GTA02, GTA2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20488 GTA02, GTA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g10620.1 GTA02, GTA2,... component SPT5 of SPT4/5 transcription elongation factor complex 0.02 OrthoFinder output from all 47 species
Pir_g48581 SPT5L, KTF1 RNA polymerase-V auxiliary factor *(KTF1/SPT5L) &... 0.01 OrthoFinder output from all 47 species
Pnu_g10106 GTA02, GTA2 component *(SPT5) of SPT4/5 transcription elongation... 0.01 OrthoFinder output from all 47 species
Solyc04g064700.4.1 GTA02, GTA2,... component SPT5 of SPT4/5 transcription elongation factor complex 0.01 OrthoFinder output from all 47 species
Spa_g04271 GTA02, GTA2 component *(SPT5) of SPT4/5 transcription elongation... 0.03 OrthoFinder output from all 47 species
Spa_g44417 GTA02, GTA2 component *(SPT5) of SPT4/5 transcription elongation... 0.01 OrthoFinder output from all 47 species
Tin_g41245 GTA02, GTA2 component *(SF3B2) of splicing factor 3B complex &... 0.01 OrthoFinder output from all 47 species
Zm00001e030789_P001 GTA02, GTA2,... component SPT5 of SPT4/5 transcription elongation factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e036210_P001 GTA02, GTA2,... component SPT5 of SPT4/5 transcription elongation factor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022581 Spt5_N 76 164
IPR005100 NGN-domain 170 253
No external refs found!