Cre01.g009650 (RAP2.7, TOE1)

Aliases : RAP2.7, TOE1

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre01.g009650
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
AT3G20840	PLT1	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
Adi_g084762	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g06694	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Cba_g11379	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Dcu_g09242	TOE3	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g47713	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Ehy_g17161	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
GSVIVT01025548001	RAP2.7, TOE1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
GSVIVT01029219001	AIL5, EMK, CHO1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
Gb_09764	WRI1, ATWRI1, ASML1, WRI	transcription factor (AP2)	0.01	OrthoFinder output from all 47 species
LOC_Os05g03040.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.01	OrthoFinder output from all 47 species
Len_g55462	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g13086	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Spa_g07247	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	1403	1454

External Links

No external refs found!

Cre01.g009650 (RAP2.7, TOE1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation