GSVIVT01038391001

Description : Probable disease resistance protein At1g12290 OS=Arabidopsis thaliana

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01038391001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00238210	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g14610...	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00088510	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s00050p00210650	evm_27.TU.AmTr_v1...	Putative disease resistance protein At1g63350...	0.04	OrthoFinder output from all 47 species
AMTR_s00071p00163290	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.03	OrthoFinder output from all 47 species
AMTR_s00078p00177570	RPS2,...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00101p00133980	RFL1,...	Disease resistance protein RFL1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00121p00125720	evm_27.TU.AmTr_v1...	Probable disease resistance protein At1g61180...	0.02	OrthoFinder output from all 47 species
AT1G12280	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.05	OrthoFinder output from all 47 species
AT1G12290	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT1G51480	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT1G61190	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.05	OrthoFinder output from all 47 species
AT1G63350	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT5G47260	No alias	ATP binding;GTP binding;nucleotide...	0.04	OrthoFinder output from all 47 species
Adi_g042385	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g31823	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01014595001	No alias	Disease resistance protein At4g27190 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01015167001	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
GSVIVT01017232001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01038446001	No alias	Probable disease resistance protein At1g52660...	0.04	OrthoFinder output from all 47 species
Gb_22529	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os01g57870.1	RPS2, LOC_Os01g57870	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os11g36410.1	RPS5, LOC_Os11g36410	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os12g10410.1	RPS2, LOC_Os12g10410	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_168565g0010	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_48202g0010	No alias	Probable disease resistance protein At5g63020...	0.04	OrthoFinder output from all 47 species
MA_5270774g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc11g007790.1.1	Solyc11g007790	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008066	glutamate receptor activity	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022835	transmitter-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0030594	neurotransmitter receptor activity	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	361	420
IPR002182	NB-ARC	2	224

External Links

No external refs found!

GSVIVT01038391001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation