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  5. GSVIVT01038243001

GSVIVT01038243001


Description : Polygalacturonase OS=Prunus persica


Gene families : OG0008809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008809_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038243001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00090p00047840 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT1G05650 No alias Pectin lyase-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT1G05660 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G43880 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G43890 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G59850 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
LOC_Os01g43490.1 LOC_Os01g43490 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species
LOC_Os11g14410.1 LOC_Os11g14410 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species
Solyc02g067630.3.1 Solyc02g067630 Polygalacturonase OS=Prunus persica... 0.05 OrthoFinder output from all 47 species
Solyc02g067640.3.1 Solyc02g067640 Polygalacturonase OS=Prunus persica... 0.03 OrthoFinder output from all 47 species
Solyc12g019220.1.1 Solyc12g019220 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species
Solyc12g019230.2.1 Solyc12g019230 Polygalacturonase OS=Prunus persica... 0.07 OrthoFinder output from all 47 species
Solyc12g096740.1.1 Solyc12g096740 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 54 378
No external refs found!