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  5. GSVIVT01037881001

GSVIVT01037881001


No description available


Gene families : OG0001482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037881001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272500 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G14880 No alias SWIB/MDM2 domain superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G34290 No alias SWIB/MDM2 domain superfamily protein 0.11 OrthoFinder output from all 47 species
Als_g12934 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.07 OrthoFinder output from all 47 species
Cba_g53830 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Ceric.28G033100.1 Ceric.28G033100 component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001065.38 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_09376 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os12g32280.1 LOC_Os12g32280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10270322g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g01587 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Spa_g12782 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Spa_g30391 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.06 OrthoFinder output from all 47 species
Zm00001e029443_P001 Zm00001e029443 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 1 66
No external refs found!