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  5. GSVIVT01037758001

GSVIVT01037758001


Description : Pirin-like protein OS=Solanum lycopersicum


Gene families : OG0002091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037758001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00186610 evm_27.TU.AmTr_v1... Pirin-like protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
AT1G50590 No alias RmlC-like cupins superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G43120 No alias RmlC-like cupins superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G59220 PRN, PRN1, ATPIRIN1 pirin 0.04 OrthoFinder output from all 47 species
Aop_g39259 No alias transcriptional co-regulator *(Pirin) & original... 0.02 OrthoFinder output from all 47 species
Aop_g47856 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Aop_g60524 No alias transcriptional co-regulator *(Pirin) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g12474 No alias transcriptional co-regulator *(Pirin) & original... 0.04 OrthoFinder output from all 47 species
MA_10061g0010 No alias Pirin-like protein OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc09g098180.4.1 Solyc09g098180 Pirin-like protein OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc12g014590.3.1 Solyc12g014590 Pirin-like protein At1g50590 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e004274_P001 Zm00001e004274 Pirin-like protein OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Zm00001e025778_P001 Zm00001e025778 Pirin-like protein OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
InterPro domains Description Start Stop
IPR008778 Pirin_C_dom 179 281
IPR003829 Pirin_N_dom 33 126
No external refs found!