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  5. GSVIVT01037543001

GSVIVT01037543001


Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 215.0) & Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia


Gene families : OG0000436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037543001
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00131000 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
Adi_g008632 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18342 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46287 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47838 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g35160 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01818 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g40161 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09258.t1 Aspi01Gene09258 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1035.g095886 No alias EC_3.2 glycosylase & original description: CDS=217-2184 0.05 OrthoFinder output from all 47 species
Azfi_s1903.g107957 No alias EC_3.2 glycosylase & original description: CDS=887-1975 0.03 OrthoFinder output from all 47 species
Cba_g13685 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G080100.1 Ceric.23G080100 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g28794 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23759 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012185001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.06 OrthoFinder output from all 47 species
GSVIVT01023452001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.08 OrthoFinder output from all 47 species
GSVIVT01023455001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 OrthoFinder output from all 47 species
GSVIVT01024793001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.06 OrthoFinder output from all 47 species
LOC_Os02g03870.1 LOC_Os02g03870 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
LOC_Os03g53790.1 LOC_Os03g53790 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
LOC_Os03g53800.3 LOC_Os03g53800 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
LOC_Os03g53860.1 LOC_Os03g53860 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
Len_g46571 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g50821 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_719501g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
Mp4g13480.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
Nbi_g02210 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22403 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15177 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002581 No alias EC_3.2 glycosylase & original description: CDS=223-2043 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012087 No alias EC_3.2 glycosylase & original description: CDS=236-2119 0.03 OrthoFinder output from all 47 species
Solyc06g073750.4.1 Solyc06g073750 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Spa_g07447 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17909 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19085 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e012037_P001 Zm00001e012037 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 OrthoFinder output from all 47 species
Zm00001e025311_P002 Zm00001e025311 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 3 280
IPR002772 Glyco_hydro_3_C 317 526
No external refs found!