Aliases : AGO4, OCP11
Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor
Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00008p00203090 | AGO4, OCP11,... | Chromatin organisation.DNA methylation.canonical... | 0.06 | OrthoFinder output from all 47 species | |
AMTR_s00044p00049370 | AGO1,... | Chromatin organisation.DNA methylation.canonical... | 0.04 | OrthoFinder output from all 47 species | |
AT1G48410 | AGO1 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.06 | OrthoFinder output from all 47 species | |
AT2G27040 | AGO4, OCP11 | Argonaute family protein | 0.05 | OrthoFinder output from all 47 species | |
AT5G43810 | PNH, AGO10, ZLL | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.03 | OrthoFinder output from all 47 species | |
Aev_g02523 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g07869 | PNH, AGO10, ZLL | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g09329 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
Als_g11793 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g17789 | AGO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g58865 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.07 | OrthoFinder output from all 47 species | |
Aob_g23145 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g08146 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g18592 | AGO9 | siRNA-integrating factor *(AGO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene29180.t1 | AGO1, Aspi01Gene29180 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene61220.t1 | AGO1, Aspi01Gene61220 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene71412.t1 | AGO9, Aspi01Gene71412 | siRNA-integrating factor *(AGO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0368.g067024 | AGO4, OCP11 | not classified & original description: CDS=1-2574 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0460.g072055 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g16425 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.28G056900.1 | AGO1, Ceric.28G056900 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.30G040900.1 | AGO4, OCP11,... | siRNA-integrating factor *(AGO) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g02891 | AGO4, OCP11 | siRNA-integrating factor *(AGO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g22733 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g18764 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
Gb_34718 | PNH, AGO10, ZLL | Protein argonaute 10 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g45070.1 | AGO1, LOC_Os02g45070 | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g58490.1 | AGO1, LOC_Os02g58490 | RIS-Complex miRNA recruiting factor (AGO1) | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os03g33650.1 | AGO7, ZIP, LOC_Os03g33650 | Protein argonaute 7 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g06770.2 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g47870.1 | AGO1, LOC_Os04g47870 | RIS-Complex miRNA recruiting factor (AGO1) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g39640.1 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.07 | OrthoFinder output from all 47 species | |
Len_g08293 | PNH, AGO10, ZLL | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g08893 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
Len_g35246 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g40869 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10427420g0010 | AGO1 | Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
MA_10429131g0010 | AGO1 | Protein argonaute 1B OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
MA_118377g0010 | AGO1 | RIS-Complex miRNA recruiting factor (AGO1) | 0.06 | OrthoFinder output from all 47 species | |
MA_594g0010 | PNH, AGO10, ZLL | Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
MA_91896g0010 | AGO1 | Protein argonaute 1B OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Mp1g18110.1 | AGO1 | RIS-Complex miRNA recruiting factor (AGO1) | 0.04 | OrthoFinder output from all 47 species | |
Msp_g13472 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g14613 | AGO4, OCP11 | siRNA-integrating factor *(AGO) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g21068 | AGO1 | regulatory protein *(AGO7) of transacting siRNA pathway... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g27281 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g40097 | AGO4, OCP11 | siRNA-integrating factor *(AGO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g23416 | PNH, AGO10, ZLL | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g02415 | AGO1 | miRNA recruiting factor (AGO) of RNA-induced silencing... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g25176 | No alias | siRNA-integrating factor *(AGO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo110151 | AGO1 | Chromatin organisation.DNA methylation.canonical... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g008960.3.1 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g096750.1.1 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g098280.4.1 | AGO1, Solyc03g098280 | RIS-Complex miRNA recruiting factor (AGO1) | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g072300.4.1 | AGO1, Solyc06g072300 | RIS-Complex miRNA recruiting factor (AGO1) | 0.06 | OrthoFinder output from all 47 species | |
Solyc07g049500.3.1 | AGO6, Solyc07g049500 | siRNA-integrating factor (AGO) | 0.05 | OrthoFinder output from all 47 species | |
Solyc12g006790.3.1 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.01 | OrthoFinder output from all 47 species | |
Spa_g23108 | AGO9 | siRNA-integrating factor *(AGO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g08802 | AGO1 | regulatory protein *(AGO7) of transacTing siRNA pathway... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g39101 | AGO1 | regulatory protein *(AGO7) of transacTing siRNA pathway... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e017367_P001 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e025496_P001 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e027670_P001 | AGO1, Zm00001e027670 | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032609_P001 | AGO4, OCP11,... | siRNA-integrating factor (AGO) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e037347_P002 | PNH, AGO10, ZLL,... | RIS-Complex miRNA recruiting factor (AGO1) | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e041452_P004 | AGO1, Zm00001e041452 | RIS-Complex miRNA recruiting factor (AGO1) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
CC | GO:0005694 | chromosome | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006284 | base-excision repair | IEP | HCCA |
BP | GO:0006298 | mismatch repair | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |