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Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor
Gene families : OG0003668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003668_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G12400 | No alias | DNA binding;zinc ion binding;DNA binding | 0.1 | OrthoFinder output from all 47 species | |
| AT5G22760 | No alias | PHD finger family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G35210 | No alias | metalloendopeptidases;zinc ion binding;DNA binding | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g107345 | No alias | PHD finger transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene36310.t1 | Aspi01Gene36310 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cre05.g247000 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g14658 | No alias | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g05130.1 | LOC_Os11g05130 | PHD finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g05757 | No alias | PHD finger transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10689g0010 | No alias | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g03480.1 | No alias | PHD finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g38137 | No alias | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03291 | No alias | PHD finger transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003692 | No alias | PHD finger transcription factor & original description:... | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g25995 | No alias | PHD finger transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g065160.3.1 | Solyc11g065160 | PHD finger transcription factor | 0.08 | OrthoFinder output from all 47 species | |
| Solyc11g066780.3.1 | Solyc11g066780 | PHD finger transcription factor | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e035778_P001 | Zm00001e035778 | PHD finger transcription factor | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |