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  5. GSVIVT01037215001

GSVIVT01037215001 (AtMAN7, MAN7)


Aliases : AtMAN7, MAN7

Description : Cell wall.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase


Gene families : OG0000482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037215001
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00202020 AtMAN7, MAN7,... Cell wall.hemicellulose.heteromannan.modification and... 0.05 OrthoFinder output from all 47 species
AMTR_s00077p00136900 AtMAN6, MAN6,... Cell wall.hemicellulose.heteromannan.modification and... 0.06 OrthoFinder output from all 47 species
AMTR_s00077p00137380 evm_27.TU.AmTr_v1... Putative mannan endo-1,4-beta-mannosidase 5 OS=Oryza... 0.05 OrthoFinder output from all 47 species
Aev_g17583 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13345 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21874 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25144 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030165001 AtMAN6, MAN6 Cell wall.hemicellulose.heteromannan.modification and... 0.05 OrthoFinder output from all 47 species
Gb_28909 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
Gb_29706 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
LOC_Os01g54300.1 MAN2, AtMAN2,... endo-beta-1,4-mannanase 0.05 OrthoFinder output from all 47 species
Len_g27216 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g09538 MAN2, AtMAN2 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
MA_6558g0010 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
MA_8330g0010 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species
Msp_g32648 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23500 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44110 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g27403 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019841 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: CDS=1-1272 0.02 OrthoFinder output from all 47 species
Smo101148 MAN5, AtMAN5 Cell wall.hemicellulose.heteromannan.modification and... 0.03 OrthoFinder output from all 47 species
Solyc07g053920.3.1 MAN2, AtMAN2,... endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
Spa_g00368 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10298 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19336 MAN2, AtMAN2 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01732 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19596 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 43 332
No external refs found!