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  5. GSVIVT01036876001

GSVIVT01036876001 (ATRLI2, RLI2)


Aliases : ATRLI2, RLI2

Description : Protein biosynthesis.translation termination.ribosome recycling factor (RLI/ABCE)


Gene families : OG0003870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003870_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036876001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Aop_g00709 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021517.10 ATRLI2, RLI2 Protein biosynthesis.translation termination.ribosome... 0.01 OrthoFinder output from all 47 species
Cre09.g409350 ATRLI2, RLI2 Protein biosynthesis.translation termination.ribosome... 0.02 OrthoFinder output from all 47 species
Dcu_g02938 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Ore_g08408 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e001568_P005 ATRLI2, RLI2,... ribosome recycling factor (RLI/ABCE) 0.03 OrthoFinder output from all 47 species
Zm00001e038251_P002 ATRLI2, RLI2,... ribosome recycling factor (RLI/ABCE) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007209 RNaseL-inhib-like_metal-bd_dom 26 57
IPR003439 ABC_transporter-like_ATP-bd 387 516
IPR003439 ABC_transporter-like_ATP-bd 122 264
IPR017896 4Fe4S_Fe-S-bd 69 91
No external refs found!