GSVIVT01036767001

Description : Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana

Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01036767001

Target	Alias	Description	ECC score	Gene Family Method
AT3G14470	No alias	NB-ARC domain-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
GSVIVT01000635001	No alias	Putative disease resistance RPP13-like protein 1...	0.07	OrthoFinder output from all 47 species
GSVIVT01000663001	No alias	Putative disease resistance protein At3g14460...	0.06	OrthoFinder output from all 47 species
GSVIVT01001459001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01012421001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01012436001	No alias	Putative disease resistance RPP13-like protein 1...	0.08	OrthoFinder output from all 47 species
GSVIVT01013307001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01022856001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01022931001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01022941001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01022963001	No alias	Putative disease resistance RPP13-like protein 1...	0.1	OrthoFinder output from all 47 species
GSVIVT01023312001	No alias	Putative disease resistance RPP13-like protein 1...	0.1	OrthoFinder output from all 47 species
GSVIVT01027229001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01027270001	No alias	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
GSVIVT01027276001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01028665001	No alias	No description available	0.06	OrthoFinder output from all 47 species
GSVIVT01032171001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01034675001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
LOC_Os04g02110.1	LOC_Os04g02110	Putative disease resistance protein At3g14460...	0.05	OrthoFinder output from all 47 species
LOC_Os04g43340.1	LOC_Os04g43340	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
LOC_Os05g34220.1	LOC_Os05g34220	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
Solyc01g106410.3.1	Solyc01g106410	Putative disease resistance protein RGA1 OS=Solanum...	0.06	OrthoFinder output from all 47 species
Solyc11g043060.1.1	Solyc11g043060	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006013	mannose metabolic process	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	15	178

External Links

No external refs found!

GSVIVT01036767001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation