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  5. GSVIVT01036736001

GSVIVT01036736001 (PHB1, ATPHB1)


Aliases : PHB1, ATPHB1

Description : Prohibitin-1, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0002789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036736001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00112040 PHB1, ATPHB1,... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Aev_g00787 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01193 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00373 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14780 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G011500.1 PHB1, ATPHB1,... not classified & original description: pacid=50584039... 0.06 OrthoFinder output from all 47 species
Cre02.g088000 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os07g15880.1 PHB2, ATPHB2,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
MA_9438062g0010 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp1g10410.1 PHB1, ATPHB1 Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g12045 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g008140.3.1 PHB1, ATPHB1,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g25323 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 72 248
No external refs found!