1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01036220001

GSVIVT01036220001


No description available


Gene families : OG0000502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000502_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036220001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00034410 evm_27.TU.AmTr_v1... No description available 0.13 OrthoFinder output from all 47 species
AT1G08790 No alias Protein of unknown function (DUF1685) 0.05 OrthoFinder output from all 47 species
AT3G04700 No alias Protein of unknown function (DUF1685) 0.08 OrthoFinder output from all 47 species
AT5G28690 No alias Protein of unknown function (DUF1685) 0.11 OrthoFinder output from all 47 species
Adi_g079642 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g17193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24831.t1 Aspi01Gene24831 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0167.g054472 No alias not classified & original description: CDS=1-825 0.03 OrthoFinder output from all 47 species
Cba_g05754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G034700.1 Ceric.11G034700 not classified & original description: pacid=50594955... 0.03 OrthoFinder output from all 47 species
Dcu_g02685 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g03254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g21340.1 LOC_Os04g21340 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Len_g15428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_29161g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g04264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011903 No alias not classified & original description: CDS=1-993 0.03 OrthoFinder output from all 47 species
Solyc01g097180.2.1 Solyc01g097180 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g38879 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14486 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g18725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008561_P001 Zm00001e008561 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e018957_P001 Zm00001e018957 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e024718_P001 Zm00001e024718 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e028557_P002 Zm00001e028557 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR012881 DUF1685 85 142
No external refs found!