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  5. GSVIVT01036130001

GSVIVT01036130001


Description : Transmembrane 9 superfamily member 5 OS=Arabidopsis thaliana


Gene families : OG0000505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036130001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00115620 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G08350 No alias Endomembrane protein 70 protein family 0.03 OrthoFinder output from all 47 species
Adi_g003344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24532 TMN1, AtTMN1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g05940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G022100.1 TMN1, AtTMN1,... not classified & original description: pacid=50599543... 0.03 OrthoFinder output from all 47 species
Ceric.34G054800.1 TMN1, AtTMN1,... not classified & original description: pacid=50624162... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.24 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g10047 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10048 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02686 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g05549 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431134g0010 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp1g16980.1 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g10835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06736 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g45907 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c8_25240V3.1 Pp3c8_25240 transmembrane nine 1 0.01 OrthoFinder output from all 47 species
Ppi_g10846 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g074310.4.1 Solyc06g074310 Transmembrane 9 superfamily member 5 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Spa_g47696 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50972 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039502_P001 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 100 593
No external refs found!