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  5. GSVIVT01035873001

GSVIVT01035873001


Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.EREX canonical RAB5 effector


Gene families : OG0002176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035873001

Target Alias Description ECC score Gene Family Method Actions
AT2G25350 No alias Phox (PX) domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g019672 No alias RAB5 canonical effector *(EREX) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15358 No alias RAB5 canonical effector *(EREX) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19085 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32083 No alias RAB5 canonical effector *(EREX) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G023200.1 Ceric.03G023200 RAB5 canonical effector *(EREX) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G069700.1 Ceric.23G069700 RAB5 canonical effector *(EREX) & original description:... 0.03 OrthoFinder output from all 47 species
Cre11.g467681 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g04197 No alias RAB5 canonical effector *(EREX) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05595 No alias RAB5 canonical effector *(EREX) & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g03590.1 No alias canonical RAB5 effector (EREX) 0.07 OrthoFinder output from all 47 species
Solyc08g042130.2.1 Solyc08g042130 canonical RAB5 effector (EREX) 0.04 OrthoFinder output from all 47 species
Zm00001e030469_P004 Zm00001e030469 canonical RAB5 effector (EREX) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
CC GO:0030173 obsolete integral component of Golgi membrane IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001683 PX_dom 63 159
No external refs found!