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  5. GSVIVT01035778001

GSVIVT01035778001 (AtDBP1, DBP1)


Aliases : AtDBP1, DBP1

Description : RNA biosynthesis.transcriptional activation.DBP transcription factor


Gene families : OG0000632 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000632_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035778001
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Sam_g10041 No alias clade G phosphatase *(DBP) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e038109_P001 Zm00001e038109 transcription factor (DBP). clade G phosphatase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 88 335
No external refs found!