GSVIVT01035644001

Description : Bark storage protein A OS=Populus deltoides

Gene families : OG0002104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002104_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01035644001
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
AT4G24340	No alias	Phosphorylase superfamily protein	0.03	OrthoFinder output from all 47 species
Aop_g17651	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene41703.t1	Aspi01Gene41703	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s1903.g107954	No alias	not classified & original description: CDS=74-1039	0.03	OrthoFinder output from all 47 species
Cba_g14092	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g26144	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g20365	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g45137	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_28226	No alias	Bark storage protein A OS=Populus deltoides...	0.04	OrthoFinder output from all 47 species
LOC_Os01g12940.1	LOC_Os01g12940	Bark storage protein A OS=Populus deltoides...	0.03	OrthoFinder output from all 47 species
LOC_Os05g13970.1	LOC_Os05g13970	Bark storage protein A OS=Populus deltoides...	0.03	OrthoFinder output from all 47 species
LOC_Os06g02210.1	LOC_Os06g02210	Bark storage protein A OS=Populus deltoides...	0.03	OrthoFinder output from all 47 species
Len_g22117	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g27634	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g08444	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g11202	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19666	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012115	No alias	not classified & original description: CDS=412-1434	0.03	OrthoFinder output from all 47 species
Sam_g14368	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc08g066890.4.1	Solyc08g066890	Bark storage protein A OS=Populus deltoides...	0.04	OrthoFinder output from all 47 species
Solyc08g066900.1.1	Solyc08g066900	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009116	nucleoside metabolic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016843	amine-lyase activity	IEP	HCCA
MF	GO:0016844	strictosidine synthase activity	IEP	HCCA
MF	GO:0050662	obsolete coenzyme binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000845	Nucleoside_phosphorylase_d	12	309

External Links

No external refs found!

GSVIVT01035644001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation