GSVIVT01035173001 (MDF, DOT2)

Aliases : MDF, DOT2

Description : SART-1 family protein DOT2 OS=Arabidopsis thaliana

Gene families : OG0004143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004143_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01035173001

Target	Alias	Description	ECC score	Gene Family Method
AT5G16780	MDF, DOT2	SART-1 family	0.07	OrthoFinder output from all 47 species
Adi_g055487	MDF, DOT2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g21182	MDF, DOT2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g17126	MDF, DOT2	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g09207	MDF, DOT2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_00217	MDF, DOT2	SART-1 family protein DOT2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Gb_12198	MDF, DOT2	SART-1 family protein DOT2 OS=Arabidopsis thaliana...	0.1	OrthoFinder output from all 47 species
Mp8g09130.1	MDF, DOT2	SART-1 family protein DOT2 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Ore_g19696	MDF, DOT2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g14031	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc11g008460.1.1	MDF, DOT2, Solyc11g008460	SART-1 family protein DOT2 OS=Arabidopsis thaliana...	0.07	OrthoFinder output from all 47 species
Solyc11g008470.2.1	MDF, DOT2, Solyc11g008470	SART-1 family protein DOT2 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Zm00001e018582_P001	MDF, DOT2, Zm00001e018582	SART-1 family protein DOT2 OS=Arabidopsis thaliana...	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000398	mRNA splicing, via spliceosome	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005011	SNU66/SART1	806	852
IPR005011	SNU66/SART1	269	785

External Links

No external refs found!

GSVIVT01035173001 (MDF, DOT2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation