1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01035168001

GSVIVT01035168001 (ATISA1, ISA1)


Aliases : ATISA1, ISA1

Description : Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme


Gene families : OG0001139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035168001
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00166810 ATISA3, ISA3,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Aev_g04122 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.02 OrthoFinder output from all 47 species
Cba_g19306 DBE1, ATISA2, BE2, ISA2 component *(ISA2) of ISA1-ISA2 isoamylase heterodimer &... 0.02 OrthoFinder output from all 47 species
Dac_g16024 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g23733 DBE1, ATISA2, BE2, ISA2 component *(ISA2) of ISA1-ISA2 isoamylase heterodimer &... 0.03 OrthoFinder output from all 47 species
Nbi_g28992 ATISA1, ISA1 component *(ISA1) of ISA1-ISA2 isoamylase heterodimer &... 0.03 OrthoFinder output from all 47 species
Solyc06g009220.4.1 ATISA3, ISA3,... starch debranching enzyme. starch-debranching... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 258 370
IPR004193 Glyco_hydro_13_N 94 188
No external refs found!