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  5. GSVIVT01035102001

GSVIVT01035102001


Description : Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana


Gene families : OG0003404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035102001
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00068270 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01020794001 No alias Polygalacturonase OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
Zm00001e002846_P002 Zm00001e002846 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.03 OrthoFinder output from all 47 species
Zm00001e030542_P001 Zm00001e030542 Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 59 378
No external refs found!