GSVIVT01034989001 (HY3, OOP1, PHYB)

Aliases : HY3, OOP1, PHYB

Description : External stimuli response.light.red/far red light.PHY phytochrome photoreceptor

Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01034989001

Target	Alias	Description	ECC score	Gene Family Method
Adi_g013003	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g02606	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g02397	HY3, OOP1, PHYB	temperature sensor protein *(PHY-B) & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g33162	HY3, OOP1, PHYB	phytochrome photoreceptor *(PHY) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g18429	FHY2, HY8, PHYA, FRE1	temperature sensor protein *(PHY-B) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01031354001	FHY2, HY8, PHYA, FRE1	External stimuli response.light.red/far red light.PHY...	0.05	OrthoFinder output from all 47 species
Lfl_g14108	HY3, OOP1, PHYB	phytochrome photoreceptor *(PHY) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g09246	HY3, OOP1, PHYB	phytochrome photoreceptor *(PHY) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e005702_P001	PHYC, Zm00001e005702	phytochrome photoreceptor (PHY)	0.04	OrthoFinder output from all 47 species
Zm00001e012154_P002	FHY2, HY8, PHYA,...	phytochrome photoreceptor (PHY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003018	GAF	195	273
IPR013767	PAS_fold	607	726
IPR013767	PAS_fold	506	591
IPR013654	PAS_2	50	166
IPR013515	Phytochrome_cen-reg	299	474
IPR003594	HATPase_C	860	964
IPR003661	HisK_dim/P	751	812

External Links

No external refs found!