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  5. GSVIVT01034965001

GSVIVT01034965001 (QQT2)


Aliases : QQT2

Description : RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor


Gene families : OG0005811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034965001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Aop_g26339 QQT2 RNA polymerase-II nuclear import factor *(GPN1) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.99 QQT2 RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.03 OrthoFinder output from all 47 species
Zm00001e038313_P002 QQT2, Zm00001e038313 GPN1 RNA polymerase-II nuclear import factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR004130 Gpn 72 310
No external refs found!