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  5. GSVIVT01034656001

GSVIVT01034656001 (ATCAT6, CAT6)


Aliases : ATCAT6, CAT6

Description : Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT-type)


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034656001

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene52622.t1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene62609.t1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene65201.t1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Dac_g09146 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01003684001 ATCAT6, CAT6 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
MA_10429855g0010 CAT7 cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
MA_10433658g0010 ATCAT6, CAT6 Cationic amino acid transporter 6, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_78005g0010 CAT7 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Mp5g21920.1 AAT1, CAT1 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Ore_g45182 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR029485 CAT_C 456 506
IPR002293 AA/rel_permease1 5 423
No external refs found!