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No description available
Gene families : OG0006384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006384_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01033469001 | |
| Cluster | HCCA: Cluster_95 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G41960 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.06 | OrthoFinder output from all 47 species | |
| AT3G58050 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g021883 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g49494 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g06059 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G064500.1 | Ceric.26G064500 | not classified & original description: pacid=50599638... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g37316 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os03g12550.1 | LOC_Os03g12550 | component MED19 of head module of MEDIATOR transcription... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g01610.1 | LOC_Os10g01610 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g08846 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g25893 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g02496 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10462 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0120.g021407 | No alias | not classified & original description: CDS=514-4191 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07178 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g079010.3.1 | Solyc10g079010 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002558_P001 | Zm00001e002558 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e012945_P002 | Zm00001e012945 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| CC | GO:0017119 | Golgi transport complex | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |