GSVIVT01033181001 (TTN7, SMC3)

Aliases : TTN7, SMC3

Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC3/TTN7 component

Gene families : OG0003981 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003981_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01033181001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00198530	TTN7, SMC3,...	Cell cycle.mitosis and meiosis.sister chromatid...	0.06	OrthoFinder output from all 47 species
AT2G27170	TTN7, SMC3	Structural maintenance of chromosomes (SMC) family protein	0.14	OrthoFinder output from all 47 species
Adi_g076982	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.06	OrthoFinder output from all 47 species
Als_g10466	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.09	OrthoFinder output from all 47 species
Aob_g19956	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.06	OrthoFinder output from all 47 species
Aspi01Gene20313.t1	TTN7, SMC3,...	component *(SMC3/TTN7) of cohesin regulator complex &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene20315.t1	TTN7, SMC3,...	component *(SMC3/TTN7) of cohesin regulator complex &...	0.03	OrthoFinder output from all 47 species
Azfi_s0147.g053026	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.05	OrthoFinder output from all 47 species
Cba_g02732	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.03	OrthoFinder output from all 47 species
Ceric.05G021600.1	TTN7, SMC3,...	component *(SMC3/TTN7) of cohesin regulator complex &...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000711.46	TTN7, SMC3	Structural maintenance of chromosomes protein 3...	0.02	OrthoFinder output from all 47 species
Cre10.g445650	TTN7, SMC3	Cell cycle.mitosis and meiosis.sister chromatid...	0.02	OrthoFinder output from all 47 species
Dac_g05785	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.03	OrthoFinder output from all 47 species
Dcu_g09520	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.08	OrthoFinder output from all 47 species
Ehy_g01683	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.03	OrthoFinder output from all 47 species
LOC_Os02g04040.1	TTN7, SMC3,...	component SMC3/TTN7 of cohesin regulator complex	0.1	OrthoFinder output from all 47 species
Len_g10423	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.02	OrthoFinder output from all 47 species
Lfl_g04244	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.03	OrthoFinder output from all 47 species
MA_10427183g0010	TTN7, SMC3	component SMC3/TTN7 of cohesin regulator complex	0.03	OrthoFinder output from all 47 species
MA_10429322g0010	TTN7, SMC3	component SMC3/TTN7 of cohesin regulator complex	0.03	OrthoFinder output from all 47 species
MA_182035g0010	TTN7, SMC3	Structural maintenance of chromosomes protein 3...	0.02	OrthoFinder output from all 47 species
MA_463997g0010	TTN7, SMC3	Structural maintenance of chromosomes protein 3...	0.04	OrthoFinder output from all 47 species
Mp5g09700.1	TTN7, SMC3	component SMC3/TTN7 of cohesin regulator complex	0.04	OrthoFinder output from all 47 species
Msp_g15587	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.04	OrthoFinder output from all 47 species
Nbi_g04455	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.05	OrthoFinder output from all 47 species
Ppi_g01382	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.05	OrthoFinder output from all 47 species
Sam_g08063	No alias	component *(SMC3/TTN7) of cohesin regulator complex &...	0.03	OrthoFinder output from all 47 species
Solyc06g073780.4.1	TTN7, SMC3,...	component SMC3/TTN7 of cohesin regulator complex	0.05	OrthoFinder output from all 47 species
Spa_g10771	TTN7, SMC3	component *(SMC3/TTN7) of cohesin regulator complex &...	0.05	OrthoFinder output from all 47 species
Zm00001e032592_P001	TTN7, SMC3,...	component SMC3/TTN7 of cohesin regulator complex	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005694	chromosome	IEA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0051276	chromosome organization	IEA	Interproscan
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	HCCA
MF	GO:0003980	UDP-glucose:glycoprotein glucosyltransferase activity	IEP	HCCA
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	HCCA
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEP	HCCA
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	HCCA
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006606	protein import into nucleus	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034504	protein localization to nucleus	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051170	import into nucleus	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010935	SMC_hinge	522	633
IPR003395	RecF/RecN/SMC_N	2	1181

External Links

No external refs found!

GSVIVT01033181001 (TTN7, SMC3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation