GSVIVT01033137001 (GLR2.8, ATGLR2.8)

Aliases : GLR2.8, ATGLR2.8

Description : Solute transport.channels.GLR ligand-gated cation channel

Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01033137001
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00140120	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.05	OrthoFinder output from all 47 species
AMTR_s00019p00180640	GLR2.8,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00180760	GLR2.3,...	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
AMTR_s00019p00181760	ATGLR2.9,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00181830	GLR2.1,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00182190	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00182440	GLR2.8,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00182630	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
AMTR_s00019p00184790	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00186040	GLR2.2,...	Solute transport.channels.GLR ligand-gated cation channel	0.06	OrthoFinder output from all 47 species
AMTR_s00062p00055860	GLR3.3,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AT2G24720	GLR2.2, ATGLR2.2	glutamate receptor 2.2	0.06	OrthoFinder output from all 47 species
AT2G29100	ATGLR2.9, GLR2.9	glutamate receptor 2.9	0.05	OrthoFinder output from all 47 species
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.08	OrthoFinder output from all 47 species
AT2G32390	ATGLR3.5, GLR6, GLR3.5	glutamate receptor 3.5	0.04	OrthoFinder output from all 47 species
AT3G04110	ATGLR1.1, GLR1.1, GLR1	glutamate receptor 1.1	0.04	OrthoFinder output from all 47 species
AT3G07520	GLR1.4, ATGLR1.4	glutamate receptor 1.4	0.03	OrthoFinder output from all 47 species
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.03	OrthoFinder output from all 47 species
AT5G11210	GLR2.5, ATGLR2.5	glutamate receptor 2.5	0.03	OrthoFinder output from all 47 species
AT5G27100	GLR2.1, ATGLR2.1	glutamate receptor 2.1	0.08	OrthoFinder output from all 47 species
AT5G48400	ATGLR1.2, GLR1.2	Glutamate receptor family protein	0.05	OrthoFinder output from all 47 species
AT5G48410	ATGLR1.3, GLR1.3	glutamate receptor 1.3	0.03	OrthoFinder output from all 47 species
Aev_g43000	GLR3.6, ATGLR3.6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g14362	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g33382	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene02193.t1	GLR3.3,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene41864.t1	ATGLR3.5, GLR6,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene54272.t2	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0038.g026117	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.22G076100.1	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Dac_g13608	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g51771	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g23222	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021161001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
GSVIVT01029195001	GLR2.2, ATGLR2.2	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
GSVIVT01029198001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
GSVIVT01033121001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
GSVIVT01033142001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.05	OrthoFinder output from all 47 species
GSVIVT01033150001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
GSVIVT01033160001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
Gb_16131	ATGLR2.9, GLR2.9	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_26917	GLR2.7, ATGLR2.7	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_27767	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_28362	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Gb_39754	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os02g54640.1	ATGLR2.9,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os06g09050.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
LOC_Os09g26000.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os09g26144.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
Lfl_g08800	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g15365	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g28228	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g29844	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
MA_10426811g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_160730g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_43501g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_9039812g0010	ATGLR3.2,...	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
MA_9796468g0010	GLR2.7, ATGLR2.7	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
Msp_g37146	ATGLR3.2,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15232	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g078860.4.1	ATGLR2.9,...	ligand-gated cation channel (GLR)	0.12	OrthoFinder output from all 47 species
Solyc04g082610.3.1	GLR3.3,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Solyc06g063170.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.07	OrthoFinder output from all 47 species
Solyc06g063180.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
Solyc06g063190.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
Solyc06g063200.2.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.06	OrthoFinder output from all 47 species
Solyc06g063210.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
Solyc08g006500.4.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.12	OrthoFinder output from all 47 species
Zm00001e009847_P001	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Zm00001e013023_P001	ATGLR3.5, GLR6,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0010215	cellulose microfibril organization	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0030198	extracellular matrix organization	IEP	HCCA
CC	GO:0031225	obsolete anchored component of membrane	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0043062	extracellular structure organization	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0050662	obsolete coenzyme binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	350	672
IPR001320	Iontro_rcpt_C	673	703
IPR001320	Iontro_rcpt_C	1584	1614
IPR001638	Solute-binding_3/MltF_N	1267	1583
IPR001828	ANF_lig-bd_rcpt	2	275
IPR001828	ANF_lig-bd_rcpt	864	1192

External Links

No external refs found!

GSVIVT01033137001 (GLR2.8, ATGLR2.8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation