GSVIVT01033108001 (ATCLC-B, CLC-B)

Aliases : ATCLC-B, CLC-B

Description : Solute transport.carrier-mediated transport.CLC anion channel / anion:proton antiporter

Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01033108001

Target	Alias	Description	ECC score	Gene Family Method
AT3G27170	ATCLC-B, CLC-B	chloride channel B	0.05	OrthoFinder output from all 47 species
AT5G40890	CLC-A, ATCLC-A,...	chloride channel A	0.05	OrthoFinder output from all 47 species
Ceric.01G063300.1	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Dde_g34063	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.05	OrthoFinder output from all 47 species
LOC_Os02g35190.1	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter (CLC)	0.02	OrthoFinder output from all 47 species
LOC_Os08g20570.1	LOC_Os08g20570	anion channel / anion:proton antiporter (CLC)	0.05	OrthoFinder output from all 47 species
Nbi_g37480	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Pir_g14943	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	Interproscan
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	None	Extended
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
CC	GO:0030286	dynein complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001807	Cl-channel_volt-gated	149	564
IPR000644	CBS_dom	718	769

External Links

No external refs found!

GSVIVT01033108001 (ATCLC-B, CLC-B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation