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No description available
Gene families : OG0002278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002278_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01032923001 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00110p00122260 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AT5G07940 | No alias | BEST Arabidopsis thaliana protein match is: dentin... | 0.1 | OrthoFinder output from all 47 species | |
| AT5G07970 | No alias | dentin sialophosphoprotein-related | 0.04 | OrthoFinder output from all 47 species | |
| AT5G07980 | No alias | dentin sialophosphoprotein-related | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g13963 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g03942 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Ala_g15227 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g15271 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18214 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g59008 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08137 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g69989 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene13983.t1 | Aspi01Gene13983 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0548.g076435 | No alias | not classified & original description: CDS=704-5134 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g33257 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G057900.1 | Ceric.11G057900 | not classified & original description: pacid=50596040... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.21G031800.1 | Ceric.21G031800 | not classified & original description: pacid=50604345... | 0.1 | OrthoFinder output from all 47 species | |
| Dac_g20518 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g10369 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g09269 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Gb_16170 | No alias | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| Gb_36190 | No alias | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os03g11460.1 | LOC_Os03g11460 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os10g16640.1 | LOC_Os10g16640 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| Len_g58594 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06766 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| MA_10437109g0010 | No alias | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| MA_13154g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_63887g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g09130.1 | No alias | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g19090 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g25739 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g12641 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g22933 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g43537 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g51717 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g64505 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g08473 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g003984 | No alias | not classified & original description: CDS=1-4320 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g36193 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g49527 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Smo406046 | No alias | No description available | 0.09 | OrthoFinder output from all 47 species | |
| Solyc03g115250.4.1 | Solyc03g115250 | no hits & (original description: none) | 0.15 | OrthoFinder output from all 47 species | |
| Solyc06g069500.3.1 | Solyc06g069500 | no hits & (original description: none) | 0.17 | OrthoFinder output from all 47 species | |
| Solyc12g038490.2.1 | Solyc12g038490 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| Spa_g57100 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g06704 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000836_P001 | Zm00001e000836 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e038728_P005 | Zm00001e038728 | no hits & (original description: none) | 0.15 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |