1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01032444001

GSVIVT01032444001


Description : Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP2 component


Gene families : OG0004097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004097_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032444001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00092040 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.microtubule Tubulin... 0.02 OrthoFinder output from all 47 species
AT5G17410 No alias Spc97 / Spc98 family of spindle pole body (SBP) component 0.05 OrthoFinder output from all 47 species
Aev_g04802 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species
Ala_g05311 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species
Ceric.13G015300.1 Ceric.13G015300 component *(GCP2) of gamma-Tubulin ring complex &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.28 No alias Cytoskeleton.microtubular network.microtubule Tubulin... 0.01 OrthoFinder output from all 47 species
Dcu_g04064 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.04 OrthoFinder output from all 47 species
LOC_Os04g42330.1 LOC_Os04g42330 component GCP2 of gamma-Tubulin ring complex (gamma-TuRC) 0.08 OrthoFinder output from all 47 species
Lfl_g02177 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.05 OrthoFinder output from all 47 species
Mp1g08820.1 No alias component GCP2 of gamma-Tubulin ring complex (gamma-TuRC) 0.03 OrthoFinder output from all 47 species
Ppi_g08933 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species
Smo78743 No alias Cytoskeleton.microtubular network.microtubule Tubulin... 0.03 OrthoFinder output from all 47 species
Solyc02g081460.4.1 Solyc02g081460 component GCP2 of gamma-Tubulin ring complex (gamma-TuRC) 0.06 OrthoFinder output from all 47 species
Zm00001e041169_P001 Zm00001e041169 component GCP2 of gamma-Tubulin ring complex (gamma-TuRC) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043015 gamma-tubulin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR040457 GCP_C 358 692
No external refs found!