GSVIVT01032404001 (ATTAP1, TAP1)

Aliases : ATTAP1, TAP1

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0001464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01032404001

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene12421.t1	Aspi01Gene12421	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000403.92	ALS1, ATTAP2, TAP2	ABC transporter B family member 25 OS=Oryza sativa...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021127.70	ALS1, ATTAP2, TAP2	ABC transporter B family member 25 OS=Oryza sativa...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021434.18	ATTAP1, TAP1	ABC transporter B family member 14 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Cre02.g083354	ALS1, ATTAP2, TAP2	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Dde_g28123	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020941	ATTAP1, TAP1	subfamily ABCB transporter & original description: CDS=3516-5711	0.03	OrthoFinder output from all 47 species
Smo441803	ALS1, ATTAP2, TAP2	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Tin_g02061	ALS1, ATTAP2, TAP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e012019_P002	ALS1, ATTAP2,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006835	dicarboxylic acid transport	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015740	C4-dicarboxylate transport	IEP	HCCA
BP	GO:0015743	malate transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	118	361
IPR003439	ABC_transporter-like_ATP-bd	431	579

External Links

No external refs found!