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  5. GSVIVT01032226001

GSVIVT01032226001 (CA18, CA2, BETA CA2)


Aliases : CA18, CA2, BETA CA2

Description : Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum


Gene families : OG0000485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032226001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0095.g043588 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: CDS=370-1197 0.03 OrthoFinder output from all 47 species
Ceric.17G069900.1 ATBCA3, BCA3,... beta-type carbonic anhydrase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G071800.1 BCA4, CA4,... beta-type carbonic anhydrase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z083800.1 ATBCA3, BCA3,... beta-type carbonic anhydrase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z083900.1 BCA4, CA4,... beta-type carbonic anhydrase & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g00812 BCA4, CA4, ATBCA4 beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23462 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007742001 CA18, CA2, BETA CA2 Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
Mp3g08980.1 CA18, CA2, BETA CA2 Carbonic anhydrase, chloroplastic OS=Pisum sativum... 0.05 OrthoFinder output from all 47 species
Msp_g12680 BCA4, CA4, ATBCA4 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002153 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: CDS=12-998 0.03 OrthoFinder output from all 47 species
Solyc02g067750.4.1 CA1, ATBCA1,... Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum... 0.07 OrthoFinder output from all 47 species
Spa_g08029 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51277 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g37806 BCA6, ATBCA6 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004506 squalene monooxygenase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR001765 Carbonic_anhydrase 271 373
No external refs found!