GSVIVT01032155001 (SMT1, CPH)

Aliases : SMT1, CPH

Description : Lipid metabolism.phytosterols.campesterol synthesis.sterol C-24 methyltransferase

Gene families : OG0000656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000656_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01032155001
Cluster	HCCA: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
Adi_g116945	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ala_g04102	SMT2, FRL1, CVP1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Ala_g08847	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Aop_g01656	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ceric.18G025100.1	SMT1, CPH,...	EC_2.1 transferase transferring one-carbon group &...	0.05	OrthoFinder output from all 47 species
LOC_Os07g10600.1	SMT1, CPH, LOC_Os07g10600	sterol C-24 methyltransferase	0.03	OrthoFinder output from all 47 species
Ore_g04633	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Solyc10g080150.2.1	SMT1, CPH, Solyc10g080150	sterol C-24 methyltransferase	0.03	OrthoFinder output from all 47 species
Spa_g24171	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Spa_g53536	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004615	phosphomannomutase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	HCCA
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	HCCA
BP	GO:0009298	GDP-mannose biosynthetic process	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
BP	GO:0019673	GDP-mannose metabolic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013216	Methyltransf_11	173	267
IPR013705	Sterol_MeTrfase_C	345	409

External Links

No external refs found!