GSVIVT01031709001 (PAB2, PABP2, ATPAB2)

Aliases : PAB2, PABP2, ATPAB2

Description : Protein biosynthesis.translation initiation.mRNA loading.PABP mRNA poly-A-tail binding factor

Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01031709001

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT2G23350	PABP4, PAB4	poly(A) binding protein 4	0.03	OrthoFinder output from all 47 species
Aop_g27434	PAB8, PABP8	mRNA poly-A-tail binding factor *(PABP) & original...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016829	lyase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	32	83
IPR000504	RRM_dom	171	241
IPR000504	RRM_dom	350	418
IPR000504	RRM_dom	453	521
IPR000504	RRM_dom	259	326
IPR002004	PABP_HYD	678	744

External Links

No external refs found!