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  5. GSVIVT01031659001

GSVIVT01031659001 (TIF3H1)


Aliases : TIF3H1

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3h component


Gene families : OG0004382 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031659001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00087p00135370 TIF3H1,... Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
AT1G10840 TIF3H1 translation initiation factor 3 subunit H1 0.03 OrthoFinder output from all 47 species
Adi_g031312 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Aop_g02099 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene20701.t1 TIF3H1, Aspi01Gene20701 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Cba_g15218 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Cba_g15219 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Cre16.g676314 TIF3H1 Protein biosynthesis.translation... 0.05 OrthoFinder output from all 47 species
LOC_Os04g30780.1 TIF3H1, LOC_Os04g30780 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.08 OrthoFinder output from all 47 species
MA_32338g0010 TIF3H1 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species
Mp3g20490.1 TIF3H1 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species
Ore_g09311 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Pp3c6_17230V3.1 TIF3H1, Pp3c6_17230 translation initiation factor 3 subunit H1 0.02 OrthoFinder output from all 47 species
Sam_g11391 No alias component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Smo153526 TIF3H1 Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Solyc09g098280.3.1 TIF3H1, Solyc09g098280 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.01 OrthoFinder output from all 47 species
Spa_g10694 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e040713_P002 TIF3H1, Zm00001e040713 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 23 126
No external refs found!