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  5. GSVIVT01031619001

GSVIVT01031619001


Description : Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana


Gene families : OG0001610 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001610_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031619001
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00117p00097230 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AMTR_s00117p00104410 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.08 OrthoFinder output from all 47 species
AT2G05790 No alias O-Glycosyl hydrolases family 17 protein 0.03 OrthoFinder output from all 47 species
AT3G07320 No alias O-Glycosyl hydrolases family 17 protein 0.03 OrthoFinder output from all 47 species
AT3G23770 No alias O-Glycosyl hydrolases family 17 protein 0.1 OrthoFinder output from all 47 species
AT4G14080 MEE48 O-Glycosyl hydrolases family 17 protein 0.1 OrthoFinder output from all 47 species
Aev_g18517 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27196 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36471 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27046.t1 Aspi01Gene27046 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G085600.1 Ceric.13G085600 EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g10948 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09682 No alias Probable glucan endo-1,3-beta-glucosidase A6... 0.03 OrthoFinder output from all 47 species
LOC_Os02g53200.1 LOC_Os02g53200 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os09g32550.1 LOC_Os09g32550 Probable glucan endo-1,3-beta-glucosidase A6... 0.04 OrthoFinder output from all 47 species
MA_10434158g0010 No alias Probable glucan endo-1,3-beta-glucosidase A6... 0.03 OrthoFinder output from all 47 species
MA_10434774g0010 No alias Probable glucan endo-1,3-beta-glucosidase A6... 0.03 OrthoFinder output from all 47 species
MA_17470g0010 No alias Probable glucan endo-1,3-beta-glucosidase A6... 0.02 OrthoFinder output from all 47 species
Mp2g08760.1 No alias Probable glucan endo-1,3-beta-glucosidase A6... 0.02 OrthoFinder output from all 47 species
Msp_g37310 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33702 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g014420.2.1 Solyc12g014420 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc12g098560.2.1 Solyc12g098560 Probable glucan endo-1,3-beta-glucosidase A6... 0.12 OrthoFinder output from all 47 species
Zm00001e003631_P001 Zm00001e003631 Probable glucan endo-1,3-beta-glucosidase A6... 0.03 OrthoFinder output from all 47 species
Zm00001e015990_P001 Zm00001e015990 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004347 glucose-6-phosphate isomerase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 286 356
IPR000490 Glyco_hydro_17 10 210
IPR000490 Glyco_hydro_17 214 260
No external refs found!