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  5. GSVIVT01031505001

GSVIVT01031505001 (ATGCN1, GCN1)


Aliases : ATGCN1, GCN1

Description : ABC transporter F family member 1 OS=Arabidopsis thaliana


Gene families : OG0003164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031505001

Target Alias Description ECC score Gene Family Method Actions
Adi_g117578 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40172 ATGCN1, GCN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51069.t1 ATGCN1, GCN1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre01.g023787 ATGCN1, GCN1 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Lfl_g01954 ATGCN1, GCN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11290 ATGCN1, GCN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29879 ATGCN1, GCN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017809_P001 ATGCN1, GCN1,... ABC transporter F family member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032781 ABC_tran_Xtn 235 267
IPR003439 ABC_transporter-like_ATP-bd 42 196
IPR003439 ABC_transporter-like_ATP-bd 276 386
No external refs found!