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  5. GSVIVT01031446001

GSVIVT01031446001


Description : RNA biosynthesis.transcriptional activation.PLATZ transcription factor


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031446001
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00211460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.05 OrthoFinder output from all 47 species
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.04 OrthoFinder output from all 47 species
AMTR_s00022p00039680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00166000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.06 OrthoFinder output from all 47 species
AT2G12646 No alias PLATZ transcription factor family protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene13991.t1 Aspi01Gene13991 PLATZ-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene13991.t2 Aspi01Gene13991 PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21595.t1 Aspi01Gene21595 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34065.t1 Aspi01Gene34065 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47095.t2 Aspi01Gene47095 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013621 No alias PLATZ-type transcription factor & original description: CDS=1-465 0.04 OrthoFinder output from all 47 species
Azfi_s0246.g060041 No alias PLATZ-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0314.g064258 No alias PLATZ-type transcription factor & original description: CDS=1-804 0.03 OrthoFinder output from all 47 species
Cba_g01815 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G040100.1 Ceric.13G040100 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G029500.1 Ceric.39G029500 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g31293 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012125001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.05 OrthoFinder output from all 47 species
LOC_Os01g33370.1 LOC_Os01g33370 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09070.1 LOC_Os02g09070 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os02g46610.1 LOC_Os02g46610 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os04g50120.1 LOC_Os04g50120 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
LOC_Os08g44620.1 LOC_Os08g44620 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
LOC_Os09g02790.1 LOC_Os09g02790 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os09g03080.1 LOC_Os09g03080 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Lfl_g16678 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_12209g0020 No alias transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
MA_8773709g0010 No alias transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
Msp_g01454 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01480 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34430 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41201 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25448 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27584 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g27974 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63891 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020601 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023339 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025441 No alias not classified & original description: CDS=1-1005 0.03 OrthoFinder output from all 47 species
Sam_g26003 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g033110.3.1 Solyc02g033110 transcription factor (PLATZ) 0.05 OrthoFinder output from all 47 species
Solyc02g036130.3.1 Solyc02g036130 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Solyc02g036140.1.1 Solyc02g036140 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Solyc07g049130.1.1 Solyc07g049130 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Spa_g29503 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07994 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09888 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013865_P001 Zm00001e013865 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Zm00001e037743_P001 Zm00001e037743 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 60 132
No external refs found!