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  5. GSVIVT01031306001

GSVIVT01031306001 (SPT16)


Aliases : SPT16

Description : Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component


Gene families : OG0002057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031306001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00682p00010920 SPT16,... Chromatin organisation.histone chaperone activities.FACT... 0.06 OrthoFinder output from all 47 species
AT4G10710 SPT16 global transcription factor C 0.07 OrthoFinder output from all 47 species
Adi_g060542 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.02 OrthoFinder output from all 47 species
Aev_g19551 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.02 OrthoFinder output from all 47 species
Ala_g02640 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Als_g04476 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.04 OrthoFinder output from all 47 species
Aob_g33291 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.07 OrthoFinder output from all 47 species
Ceric.13G070600.1 SPT16, Ceric.13G070600 component *(SPT16) of FACT histone chaperone complex &... 0.08 OrthoFinder output from all 47 species
Dcu_g03153 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.04 OrthoFinder output from all 47 species
Gb_09795 SPT16 component SPT16 of FACT histone chaperone complex 0.04 OrthoFinder output from all 47 species
LOC_Os04g25550.1 SPT16, LOC_Os04g25550 component SPT16 of FACT histone chaperone complex 0.1 OrthoFinder output from all 47 species
Len_g04839 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
MA_10427450g0010 SPT16 component SPT16 of FACT histone chaperone complex 0.05 OrthoFinder output from all 47 species
MA_10430230g0030 SPT16 component SPT16 of FACT histone chaperone complex 0.05 OrthoFinder output from all 47 species
Mp1g28760.1 SPT16 component SPT16 of FACT histone chaperone complex 0.08 OrthoFinder output from all 47 species
Nbi_g07101 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.05 OrthoFinder output from all 47 species
Ore_g30315 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.09 OrthoFinder output from all 47 species
Ore_g38685 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.04 OrthoFinder output from all 47 species
Ppi_g03995 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021592 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.06 OrthoFinder output from all 47 species
Smo170207 SPT16 Chromatin organisation.histone chaperone activities.FACT... 0.05 OrthoFinder output from all 47 species
Solyc01g101020.4.1 SPT16, Solyc01g101020 component SPT16 of FACT histone chaperone complex 0.04 OrthoFinder output from all 47 species
Spa_g12849 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Spa_g25832 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Tin_g09326 SPT16 component *(SPT16) of FACT histone chaperone complex &... 0.08 OrthoFinder output from all 47 species
Zm00001e013464_P001 SPT16, Zm00001e013464 component SPT16 of FACT histone chaperone complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR029148 FACT-Spt16_Nlobe 25 66
IPR013719 RTT106/SPT16-like_middle_dom 530 582
IPR000994 Pept_M24 88 219
IPR013953 FACT_Spt16 270 424
No external refs found!